CanIsoNet

Gene Name:

Transcript ID:
Transcript Name:
dMDT Interaction Network

Protein interaction losses due to MDT switch
*only proteins having domain-domain interaction information are taken into consideration
Number of Total Interaction:
Number of Lost Interaction:
Gene Name Interaction Lost Lost Domain (Region) Lost Domain - Domain Interaction
NEDD8 NEDD8-TGFBR2 ubiquitin(6-74) ubiquitin(6-74) - Pkinase
NEDD8 NEDD8-CDC34 ubiquitin(6-74) ubiquitin(6-74) - UQ_con
NEDD8 NEDD8-UBE2M ubiquitin(6-74) ubiquitin(6-74) - UQ_con
NEDD8 NEDD8-UBE2F ubiquitin(6-74) ubiquitin(6-74) - UQ_con
NEDD8 NEDD8-UBE2F-SCLY ubiquitin(6-74) ubiquitin(6-74) - UQ_con
NEDD8 NEDD8-UBC ubiquitin(6-74) ubiquitin(6-74) - ubiquitin
NEDD8 NEDD8-UBL5 ubiquitin(6-74) ubiquitin(6-74) - ubiquitin
NEDD8 NEDD8-PARK2 ubiquitin(6-74) ubiquitin(6-74) - ubiquitin
NEDD8 NEDD8-USP21 ubiquitin(6-74) ubiquitin(6-74) - UCH
NEDD8 NEDD8-CBL ubiquitin(6-74) ubiquitin(6-74) - UBA
NEDD8 NEDD8-MDM2 ubiquitin(6-74) ubiquitin(6-74) - zf-RanBP
NEDD8 NEDD8-UBA2 ubiquitin(6-74) ubiquitin(6-74) - ThiF
NEDD8 NEDD8-NAE1 ubiquitin(6-74) ubiquitin(6-74) - ThiF
NEDD8 NEDD8-UBA1 ubiquitin(6-74) ubiquitin(6-74) - ThiF
NEDD8 NEDD8-UBA3 ubiquitin(6-74) ubiquitin(6-74) - ThiF
NEDD8 NEDD8-UCHL3 ubiquitin(6-74) ubiquitin(6-74) - Peptidase_C12
NEDD8 NEDD8-COPS6 ubiquitin(6-74) ubiquitin(6-74) - JAB
NEDD8 NEDD8-COPS5 ubiquitin(6-74) ubiquitin(6-74) - JAB
NEDD8 NEDD8-PSMD4 ubiquitin(6-74) ubiquitin(6-74) - UIM
NEDD8 NEDD8-SENP8 ubiquitin(6-74) ubiquitin(6-74) - Peptidase_C48
NEDD8 NEDD8-SKP1 ubiquitin(6-74) ubiquitin(6-74) - Skp1_POZ
NEDD8 NEDD8-TCEB1 ubiquitin(6-74) ubiquitin(6-74) - Skp1_POZ
NEDD8 NEDD8-CUL3 ubiquitin(6-74) ubiquitin(6-74) - Cullin_Nedd8
NEDD8 NEDD8-CUL1 ubiquitin(6-74) ubiquitin(6-74) - Cullin_Nedd8
NEDD8 NEDD8-CUL4A ubiquitin(6-74) ubiquitin(6-74) - Cullin_Nedd8
NEDD8 NEDD8-CUL5 ubiquitin(6-74) ubiquitin(6-74) - Cullin_Nedd8
NEDD8 NEDD8-CUL4B ubiquitin(6-74) ubiquitin(6-74) - Cullin_Nedd8
NEDD8 NEDD8-CUL2 ubiquitin(6-74) ubiquitin(6-74) - Cullin_Nedd8
NEDD8 NEDD8-RBX1 ubiquitin(6-74) ubiquitin(6-74) - zf-rbx1
NEDD8 NEDD8-SKP2 ubiquitin(6-74) ubiquitin(6-74) - F-box-like
NEDD8 NEDD8-BTRC ubiquitin(6-74) ubiquitin(6-74) - F-box-like
NEDD8 NEDD8-FBXO11 ubiquitin(6-74) ubiquitin(6-74) - F-box-like

Network Density Score: %

The local network of this protein has more interaction than % of all proteins in the proteome.
Statistics on dMDT
*This transcript has been found as a dMDT in these diseases
Samples showing lost interactions due to MDT switch
Sample ID Disease Type Gene Name 1 Gene Name 2 Transcript Name dMDT
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 TGFBR2 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CDC34 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBE2M NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBE2F NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBE2F-SCLY NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBC NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBL5 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 PARK2 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 USP21 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CBL NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 MDM2 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBA2 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 NAE1 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBA1 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UBA3 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 UCHL3 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 COPS6 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 COPS5 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 PSMD4 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 SENP8 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 SKP1 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 TCEB1 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CUL3 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CUL1 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CUL4A NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CUL5 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CUL4B NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 CUL2 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 RBX1 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 SKP2 NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 BTRC NEDD8-002 ENST00000396828
37725090-996e-4ab2-bbf6-dc3d2970e387 Esophagus.Eso-AdenoCA NEDD8 FBXO11 NEDD8-002 ENST00000396828
Interaction losses with Clinvar proteins
Gene Name
CBL
CUL3
CUL4B
FBXO11
MDM2
TGFBR2
UBA1