CanIsoNet

CanIsoNet: Disease-specific Isoform Interaction Network

A gateway to understand the functional role of disease-specific isoform switching events

Gene Search: Examples: #1 #2

Isoform Search: Examples: #1 #2



Browse A Disease Type
Project Code Disease Name Dataset
Biliary-AdenoCA Billiary adenocarcinoma PCAWG
Bladder-TCC Bladder transitional cell carcinoma PCAWG
Bone-Leiomyo Bone/Soft Tissue leiomyosarcoma PCAWG
Breast-AdenoCA Breast adenocarcinoma PCAWG
Breast-LobularCA Breast lobular carcinoma PCAWG
Cervix-SCC Cervix squamous cell carcinoma PCAWG
CNS-GBM CNS glioblastoma PCAWG
CNS-Oligo CNS oligodendroglioma PCAWG
ColoRect-AdenoCA Colon/Rectum adenocarcinoma PCAWG
Eso-AdenoCA Esophagus adenocarcinoma PCAWG
Kidney-ChRCC Kidney renal cell carcinoma-chromophobe type PCAWG
Kidney-RCC Kidney renal cell carcinoma-clear cell and papillary PCAWG
Liver-HCC Liver hepatocellular carcinoma PCAWG
Lung-AdenoCA Lung adenocarcinoma PCAWG
Lung-SCC Lung squamous cell carcinoma PCAWG
Lymph-BNHL Lymphoid mature B-cell lymphoma PCAWG
Lymph-CLL Lymphoid chronic lymphocytic leukemia PCAWG
Ovary-AdenoCA Ovary adenocarcinoma PCAWG
Panc-AdenoCA Pancreas adenocarcinoma PCAWG
Prost-AdenoCA Prostate adenocarcinoma PCAWG
Skin-Melanoma Skin Melanoma PCAWG
Stomach-AdenoCA Stomach adenocarcinoma PCAWG
Thy-AdenoCA Thyroid adenocarcinoma PCAWG
Uterus-AdenoCA Uterus adenocarcinoma PCAWG
PRJNA433105 Opioid-induced hyperalgesia PRJNA433105
Head-SCC Head and neck squamous cell carcinoma PCAWG
Cervix-AdenoCA Cervical adenocarcinoma PCAWG
Lymph-NOS Lymphoma-not otherwise specified PCAWG


Citation:
If you use CanIsoNet, please cite the following articles :
Kahraman et al., Pathogenic impact of transcript isoform switching in 1,209 cancer samples covering 27 cancer types using an isoform-specific interaction network, Scientific Reports, 2020.
Karakulak et al.,CanIsoNet: A Database to Study the Functional Impact of Isoform Switching Events in Cancer, BioRxiv, 2021.
If you have any inquires about CanIsoNet:

Please check Help page or contact via tuelay.karakulak@usz.ch.

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