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Cancer-specific cMDTs
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This work is licensed under a Creative Commons Attribution 4.0 International License.
CanIsoNet:
Disease-specific Isoform Interaction Network
A gateway to understand the functional role of disease-specific isoform switching events
Human
Mouse
Gene Search:
Examples:
#1
#2
Isoform Search:
Examples:
#1
#2
Browse A Disease Type
Project Code
Disease Name
Dataset
Biliary-AdenoCA
Billiary adenocarcinoma
PCAWG
Bladder-TCC
Bladder transitional cell carcinoma
PCAWG
Bone-Leiomyo
Bone/Soft Tissue leiomyosarcoma
PCAWG
Breast-AdenoCA
Breast adenocarcinoma
PCAWG
Breast-LobularCA
Breast lobular carcinoma
PCAWG
Cervix-SCC
Cervix squamous cell carcinoma
PCAWG
CNS-GBM
CNS glioblastoma
PCAWG
CNS-Oligo
CNS oligodendroglioma
PCAWG
ColoRect-AdenoCA
Colon/Rectum adenocarcinoma
PCAWG
Eso-AdenoCA
Esophagus adenocarcinoma
PCAWG
Kidney-ChRCC
Kidney renal cell carcinoma-chromophobe type
PCAWG
Kidney-RCC
Kidney renal cell carcinoma-clear cell and papillary
PCAWG
Liver-HCC
Liver hepatocellular carcinoma
PCAWG
Lung-AdenoCA
Lung adenocarcinoma
PCAWG
Lung-SCC
Lung squamous cell carcinoma
PCAWG
Lymph-BNHL
Lymphoid mature B-cell lymphoma
PCAWG
Lymph-CLL
Lymphoid chronic lymphocytic leukemia
PCAWG
Ovary-AdenoCA
Ovary adenocarcinoma
PCAWG
Panc-AdenoCA
Pancreas adenocarcinoma
PCAWG
Prost-AdenoCA
Prostate adenocarcinoma
PCAWG
Skin-Melanoma
Skin Melanoma
PCAWG
Stomach-AdenoCA
Stomach adenocarcinoma
PCAWG
Thy-AdenoCA
Thyroid adenocarcinoma
PCAWG
Uterus-AdenoCA
Uterus adenocarcinoma
PCAWG
PRJNA433105
Opioid-induced hyperalgesia
PRJNA433105
Head-SCC
Head and neck squamous cell carcinoma
PCAWG
Cervix-AdenoCA
Cervical adenocarcinoma
PCAWG
Lymph-NOS
Lymphoma-not otherwise specified
PCAWG
Citation:
If you use CanIsoNet, please cite the following articles :
Kahraman et al.,
Pathogenic impact of transcript isoform switching in 1,209 cancer samples covering 27 cancer types using an isoform-specific interaction network
, Scientific Reports, 2020.
Karakulak et al.,
CanIsoNet: A Database to Study the Functional Impact of Isoform Switching Events in Cancer
, BioRxiv, 2021.
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